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TCGA Bundle for Anduril

Anduril is an open source component-based workflow framework for scientific data analysis. It was designed to enable systematic, flexible and efficient data analysis, particularly in the field of high-throughput experiments in biomedical research.

The Cancer Genome Atlas (TCGA) is a comprehensive and coordinated effort to accelerate understanding of the molecular basis of cancer through the application of genome analysis technologies, including large-scale genome sequencing.

The bundle encompasses routines to handle TCGA microarray, clinical and sequencing data as well as importing TCGA data into pipelines. The bundle’s components automatize the download of data from theTCGA data portal, and supports TCGA specific features such as data levels and batches. The download components automatically annotate array files with their TCGA sample codes.

For more details on TCGA Bundle please click here.

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